
Preprint Club
A cross-institutional Journal Club Initiative
Latest Preprint Reviews

CDKN2ALow cancer cells outcompete macrophages for microenvironmental zinc to drive immunotherapy resistance.
Buj et al. (BioRxiv) DOI: 10.1101/2025.02.08.637227

Type 1 interferons induced upon respiratory viral infection impair lung metastatic initiation
Farais et al. (BioRxiv) DOI: 10.1101/2024.12.23.630113

Tumor-associated macrophages enhance tumor innervation and spinal cord repair
Dolci et al. (BioRxiv) DOI: 10.1101/2024.12.19.629374

BLOC1S1 control of vacuolar organelle fidelity modulates TH2 cell immunity and allergy susceptibility
Sharma et al. (BioRxiv) DOI: 10.1101/2024.03.21.586144

Macrophages orchestrate elimination of Shigella from the intestinal epithelial cell niche via TLR-induced IL-12 and IFN-γ
Eislmayr et al. (BioRxiv) DOI:10.1101/2025.01.20.633976

Discovery of a Potent and Selective Inhibitor of Human NLRP3 with a Novel Binding Modality and Mechanism of Action
Wilhelmsen et al. (BioRxiv) DIO: 10.1101/2024.12.21.629867

IL-10 Targets IRFs to Suppress IFN and Inflammatory Response Genes by Epigenetic Mechanisms
Bikash Mishra et al. (BioRxiv) DOI: 10.1101/2024.11.07.622491

Lymph Node Fibroblast Phenotypes and Immune Crosstalk Regulated by Podoplanin Activity
Makris et al. (BioRxiv) DOI: 10.1101/2022.12.01.518753

Dietary Restriction Enhances CD8⁺ T Cell Ketolysis to Limit Exhaustion and Boost Anti-Tumor Immunity
Oswald B.M. et al. (BioRxiv) DOI: 10.1101/2024.11.14.621733

Early life RSV infection as a preventable risk factor for asthma
De Leeuw et al., Research Square , DOI: 10.21203/rs.3.rs-5366915

Peptide-MHC-targeted retroviruses enable in vivo expansion and gene delivery to tumor-specific T cells
Xu et al. (BioRxiv). DOI: 10.1101/2024.09.18.613594

Immunopeptidomics informs discovery and delivery of Mycobacterium tuberculosis MHC-II antigens for vaccine design
Leddy et al. (BioRxiv) DOI: 10.1101/2024.10.02.616386

PD-1 controls differentiation, survival, and TCR affinity evolution of stem-like CD8+ T cells
Hor et al. (BioRxiv) DOI: 10.1101/2024.08.02.606241

Synaptic synergy of T cell receptor and interleukin 2 receptor in CD8+ T cells
Capera et al. (BioRxiv) DOI: 10.1101/2024.08.13.607831

Androgen Signaling Restricts Glutaminolysis to Drive Sex-Specific Th17 Metabolism
Chowdhury et al. (BioRxiv) DOI: 10.1101/2023.02.10.527741

B cell-mediated antigen presentation promotes adverse cardiac remodeling in chronic heart failure
Lovell et al. (BioRxiv) DOI:10.1101/2024.05.08.593153

Inhibition of NFAT promotes loss of tissue resident uterine natural killer cells and attendant pregnancy complications in humans
Asiimwe et al. (BioRxiv) DOI: 10.1101/2024.03.07.583906

Epigenetic signature and key transcriptional regulators of human antigen-specific type 1 regulatory T cells
Alma-Martina Cepika, et al. (BioRxiv) DOI: 10.1101/2024.03.07.582969

Low Avidity T cells drive endogenous tumor immunity in mice and humans
Singhaviranon et al. (Research Square) DOI: 10.21203/rs.3.rs-3903457/v1

Granzyme B-based CAR T cells block metastasis by eliminating circulating tumor cells
Bin Sun, et.al. (BioRxiv) DOI: 10.1101/2024.03.18.585442

Interleukin-1 receptor antagonist is a conserved driver of tuberculosis
Kotov. et al. (BioRxiv) DOI: 10.1101/2023.10.27.564420

CD39 is expressed on functional effector and tissue resident memory CD8+ T cells
Isaacs, JF et al. (BioRxiv) DOI: 10.1101/2024.03.15.585252v1

Microbiota encoded fatty-acid metabolism expands tuft cells to protect tissues homeostasis during Clostridioides difficile infection in the large intestine
Kellogg et al. (BioRxiv) DOI: 10.1101/2024.01.29.574039

Host-derived oxidized phospholipids initiate effector-triggered immunity fostering lethality upon microbial encounter.
Di Gioia et al. (BioRxiv) DOI: 10.1101/2023.11.21.568047

Cytotoxic CD4+ T cells in the bone marrow compromise healthy ageing by enhancing granulopoiesis
Enrique Gabamdé-Rodrigez, Gonzalo Soto-Heredero, et al. (BioRxiv) DOI: 10.1101/2024.01.26.577360

IQGAP2 regulates blood-brain barrier immune dynamics
Katdare KA et al. (BioRxiv) DOI: 10.1101/2023.02.07.527394

Cancer immunotherapy responses persist after lymph node resection
Zhou H et al. (BioRxiv) DOI: 10.1101/2023.09.19.558262

Lymphatic vessel transit seeds precursors to cytotoxic resident memory T cells in skin draining lymph nodes
Heim, et al. (BioRxiv) DOI: 10.1101/2023.08.29.555369

Convergent evolution of monocyte differentiation in adult skin instructs Langerhans cell identity
Appios A, Daview J, Sirvent S, et al. (BioRxiv) DOI: 10.1101/2023.11.13.566862

Interpretable inflammation landscape of circulating immune cells
Jimenez-Gracia et al. (BioRxiv) DOI: 10.1101/2023.11.28.568839

Monocyte-derived microglia with Dnmt3a mutation cause motor pathology in aging mice
Kim et al. (BioRxiv) DOI:10.1101/2023.11.16.567402

A Specialized Epithelial Cell Type Regulating Mucosal Immunity and Driving Human Crohn’s Disease
Li et al. (BioRxiv) DOI: 10.1101/2023.09.30.560293

Single cell analysis uncovers striking cellular heterogeneity of lung infiltrating Tregs during eosinophilic vs. neutrophilic allergic airway inflammation
Iamsawat et al. (BioRxiv) DOI: 10.1101/2023.09.23.559152

Iron is critical for mucosal-associated invariant T cell metabolism and effector functions.
Eimear R. et al. (Research Square) DOI: 10.21203/rs.3.rs-3358434/v1

A spatial human thymus cell atlas mapped to a continuous tissue axis
Yayon*, Kedlian*, Boehme* et al. (BioRxiv) DOI: 10.1101/2023.10.25.562925

Immune landscape of tertiary lymphoid structures in hepatocellular carcinoma (HCC) treated with neoadjuvant immune checkpoint blockade
Shu D.H. et al. (BioRxiv) DOI: 10.1101/2023.10.16.562104

Multimodal profiling of peripheral blood identifies proliferating circulating effector CD4+ T cells as predictors for response to integrin α4β7-blocking therapy in patients with inflammatory bowel disease
Horn V. et al. (BioRxiv) DOI: 10.1101/2023.10.01.560386

Maternal IL-10 restricts fetal emergency myelopoiesis
Collins A. et al. (BioRxiv) DOI: 10.1101/2023.09.13.557548

Murine classical monocyte subsets display distinct functions and fates
Trzebanski et al. (BioRxiv) DOI: 10.1101/2023.07.29.551083

Commensal myeloid crosstalk in neonatal skin regulates long-term cutaneous type 17 inflammation
Dhariwala M.O. et al. (BioRxiv) DOI:10.1101/2023.09.29.560039

TAPIR: a T-cell receptor language model for predicting rare and novel targets.
Fast et al. (BioRxiv) DOI: 10.1101/2023.09.12.557285

Bacterial Sphingolipids Exacerbate Colitis by Inhibiting ILC3-derived IL-22 Production
Bao, B. et al. (BioRxiv) DOI: 10.1101/2023.09.05.555400

HIF-1α-mediated mitochondrial-glycolytic reprogramming controls the transition of precursor to terminally exhausted T cells
Wu et al. (BioRxiv) DOI: 10.1101/2023.08.31.555662

Temporal profiling of human lymphoid tissues reveals coordinated defence to viral challenge
Coates M.L. et al. (BioRxiv) DOI: 10.1101/2023.09.15.558006

Homeostatic, repertoire and transcriptional relationships between colon T regulatory cell subsets.
Ramanan D. et al. (BioRxiv) DOI: 10.1101/2023.05.17.541199

Memory Th1 cells modulate heterologous diseases through innate function.
Rakebrandt*, Yassini* et al. (BioRxiv) DOI: 10.1101/2023.03.22.533799

T:B cell communication in ectopic lymphoid follicles in CNS autoimmunity
Kolz A. et al. (bioRxiv) DOI:10.1101/2023.06.01.543004

Perforin-2 is a pore-forming effector of endocytic escape in cross-presenting dendritic cells
Rodríguez-Silvestre et al. (BioRxiv) DOI: 10.1101/2023.01.31.525875

Antigen-presenting type-I conventional dendritic cells facilitate curative checkpoint blockade immunotherapy in pancreatic cancer
Mahadevan K.K. et al. (BioRxiv) DOI: 10.1101/2023.03.05.531191

Unstable EBV latency drives inflammation in multiple sclerosis patient derived spontaneous B cells
Soldan S. et al. (Research Square) DOI: 10.21203/rs.3.rs-2398872/v1

Tregs constrain CD8+ T cell priming required for curative intratumorally anchored anti-4-1BB immunotherapy
Palmeri J.R. et al. (BioRxiv) DOI:10.1101/2023.01.30.526116

A Novel MHC-Independent Mechanism of Tumor Cell Killing by CD8+ T Cells
Lerner*, Woroniecka* et al. (BioRxiv). DOI: 10.1101/2023.02.02.526713

A Distinct Phenotype of Polarized Memory B Cell holds IgE Memory
Koenig, J. et al. (BioRxiv) DOI: 10.1101/2023.01.25.525495

Sexual dimorphism in obesity is governed by RELMα regulation of adipose macrophages and eosinophils
Li, J. et al. (BioRxiv) DOI: 10.1101/2023.01.13.523880

A conserved family of immune effectors cleaves cellular ATP upon viral infection
Rousset, F et al. (BioRxiv) DOI: 10.1101/2023.01.24.525353

Synthetic STING agonists elicit powerful vaccine adjuvancy providing robust central memory and anti-tumor effects
Towner et al. (BioRxiv) DOI: 10.1101/2023.01.04.522614

The maternal microbiome regulates infant respiratory disease susceptibility via intestinal Flt3L expression and plasmacyoid dendritic cell haematopoiesis
Sikder M.A.A. et al. (BioRxiv) DOI: 10.1101/2023.01.05.522516

Human T follicular helper clones seed the germinal center-resident regulatory pool
Le Coz C. et al. (BioRxiv) DOI: 10.1101/2022.10.26.513910

Immunogenicity of non-canonical HLA-I tumor ligands identified through proteogenomics
Lozano-Rabella, M. et al. (BioRxiv) DOI: 10.1101/2022.11.07.514886

Human intestinal epithelial cells can internalize luminal fungi via LC3-associated phagocytosis
Cohen-Kedar, S. et al. (BioRxiv) DOI: 10.1101/2022.12.14.520372

B cell depletion attenuates CD27 signaling of T helper cells in multiple sclerosis
Ulutekin, C. et al. (MedRxiv) DOI: 10.1101/2022.10.17.22281079

Cystatin F (Cst7) drives sex-dependent changes in microglia in an amyloid-driven model of Alzheimer’s Disease
Daniels M.J.D. et al. (BioRxiv) DOI: 10.1101/2022.11.18.516922

Enhanced STAT5a activation rewires exhausted CD8 T cells during chronic stimulation to acquire a hybrid durable effector like state
Beltra J.-C. et al. (BioRxiv) DOI: 10.1101/2022.10.03.509766

Eradication of tumors with pre-existing antigenic heterogeneity by vaccine-mediated co-engagement of CAR T and endogenous T-cells
Ma Y. et al. (BioRxiv) DOI: 10.1101/2022.10.05.511036

Single-cell transcriptomics of resected human traumatic brain injury tissues reveals acute activation of endogenous retroviruses in oligodendrocytes
Garza R. et al. (BioRxiv) DOI: 10.1101/2022.09.07.506982

Release of the pre-assembled naRNA-LL37 composite DAMP re-defines neutrophil extracellular traps (NETs) as intentional DAMP webs
Bork F. et al. (BioRxiv) DOI: 10.1101/2022.07.26.499571

Long-term retention of antigens in germinal centres is controlled by the spatial organisation of the follicular dendritic cell network
Martinez-Riano A. et al. (BioRxiv) DOI: 10.1101/2022.09.06.506650

GATA4 regionalizes intestinal metabolism and barrier function to prevent immunopathology
Earley Z. et al. (BioRxiv) DOI: 10.1101/2021.10.28.466194

Terminal differentiation and persistence of effector regulatory T cells essential for the prevention of intestinal inflammation
Dikiy S. et al. (BioRxiv) DOI: 10.1101/2022.05.16.492030

A unique epigenomic landscape defines CD8+ tissue-resident memory T cells
Buquicchio F. et al. (BioRxiv) DOI: 10.1101/2022.05.04.490680

Unaltered T cell responses to common antigens in individuals with Parkinson’s disease
Williams G.P. et al. (BioRxiv) DOI: 10.1101/2022.04.05.487195